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Although both Pokémon are seen on the box, neither Groudon, nor Kyogre can be caught in the game. This is the first, and (so far) only time that a Pokémon that appears on a game's cover is not found in the game.
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Spoiler:After you've caught every Shadow Pokémon except one, a trainer appears at Outskirt Stand. His entire team, except his Shadow Togetic, will be made up of the Pokémon that replaced the Cipher Admins' Shadow Pokémon during their rematches. Before the battle begins, he also states "I am you and you are me and we are all together," a line from The Beatles' song "I Am the Walrus".
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